113 research article A statistical model describing combined irreversible electroporation and electroporation-induced blood-brain barrier disruption Shirley Sharabi12, Bor Kos3, David Last1, David Guez1, Dianne Daniels12, Sagi Harnof24, Yael Mardor12, Damijan Miklavcic3 1 The Advanced Technology Center, Sheba Medical Center, Ramat-Gan, Israel 2 Sackler Faculty of Medicine, Tel-Aviv University, Tel-Aviv, Israel 3 University of Ljubljana, Faculty of Electrical Engineering, Ljubljana, Slovenia 4 Neurosurgery Department, Sheba Medical Center, Ramat-Gan, Israel Radiol Oncol 2016; 50(1): 28-38. Received 23 October 2015 Accepted 3 January 2016 Correspondence to: Dr. Yael Mardor, Ph.D., The Advanced Technology Center, Sheba Medical Center Tel-Hashomer, 52621 Israel. Phone: +972 3 530 2993; Fax: 972 3 530 3146; E-mail: yael.mardor@sheba.health.gov.il Disclosure: We declare that Damijan Miclavcic holds patents in the area of electroporation and is consulting for various companies with financial interest in the area of electroporation use in medicine. The other authors declare no competing financial interests. Background. Electroporation-based therapies such as electrochemotherapy (ECT) and irreversible electroporation (IRE) are emerging as promising tools for treatment of tumors. When applied to the brain, electroporation can also induce transient blood-brain-barrier (BBB) disruption in volumes extending beyond IRE, thus enabling efficient drug penetration. The main objective of this study was to develop a statistical model predicting cell death and BBB disruption induced by electroporation. This model can be used for individual treatment planning. Material and methods. Cell death and BBB disruption models were developed based on the Peleg-Fermi model in combination with numerical models of the electric field. The model calculates the electric field thresholds for cell kill and BBB disruption and describes the dependence on the number of treatment pulses. The model was validated using in vivo experimental data consisting of rats brains MRIs post electroporation treatments. Results. Linear regression analysis confirmed that the model described the IRE and BBB disruption volumes as a function of treatment pulses number (r2 = 0.79; p < 0.008, r2 = 0.91; p < 0.001). The results presented a strong plateau effect as the pulse number increased. The ratio between complete cell death and no cell death thresholds was relatively narrow (between 0.88-0.91) even for small numbers of pulses and depended weakly on the number of pulses. For BBB disruption, the ratio increased with the number of pulses. BBB disruption radii were on average 67% ± 11% larger than IRE volumes. Conclusions. The statistical model can be used to describe the dependence of treatment-effects on the number of pulses independent of the experimental setup. Key words: electroporarion; blood brain barrier; Peleg-Fermi Introduction Electroporation (EP) is a physical phenomenon in which electric fields make cell membranes transiently permeable to ions and macromolecules which are otherwise deprived of or have limited trans-membrane transport mechanisms.1-3 Electric pulses applied to the tissue induce an electric field which in turn induces a change in cell membrane potential. This change depends on various tissue related parameters such as tissue type and cell size as well as pulse parameters including pulse ampli- Radiol Oncol 2016; 50(1): 113-120. doi:28.1515/raon-2015-0015 Sharabi S et al. / A statistical model describing brain electroporation 29 tude, shape, duration, number of pulses, and pulse repetition frequency. As a function of the induced electrical field, electric pulses can either: reversibly permeabilize the cell membrane (reversible EP) or permeabilize the cell membrane in a manner that leads to cell death (irreversible EP).4 It was recently demonstrated that when applying EP to brain tissue it also induces reversible disruption of the blood-brain barrier (BBB).5-7 Both irreversible EP (IRE), and reversible EP combined with chemotherapy, also known as electrochemotherapy (ECT), are emerging as new treatment techniques for solid tumors.38-16 ECT uses EP to allow increased uptake of chemothera-peutic drugs into tumor cells12 and IRE is a method aimed at inducing tumor ablation without thermal damage.1718 Brain tumors are excellent candidates for local EP treatment. Glioblastoma multiforme (GBM) is the most frequent and most aggressive primary brain tumor with an average survival of 14 months from diagnosis. Existing treatments offer poor prognosis for GBM mainly due to tumor infiltration into the surrounding brain, high resistance to therapeutic apoptotic stimuli and poor BBB penetration of most therapeutic agents.1920 A combined approach, consisting of inducing significant/ rapid necrosis in the tumor mass and simultaneous delivery of high chemotherapy doses to the tumor and surrounding infiltrating zone is suggested as a treatment strategy. EP-induced tissue necrosis within the massive region of the tumor and surrounding BBB disruption, enabling efficient local delivery of systemically administered chemotherapy was recently demonstrated.721 Individual treatment planning is an important key for EP-based treatment success.22 Treatment parameters should be chosen in such a manner that will induce maximal damage to the tumor while sparing surrounding healthy tissue. This is usually done by numerical models. Several numerical models describing the electric filed distribution in the tissue have been introduced, and are applied for predicting treatment outcome and planning the electrodes placement to ensure full tumor coverage by electrical fields higher than the EP threshold.23-28 These models are usually based on experimental data. Treatment volumes calculated from MRI29 or histological data3031 are incorporated into computerized models together with the organ characteristics and the electrodes configuration. These calculations traditionally use deterministic models, i.e all the cells exposed to electrical fields higher than a specific threshold, known in the literature, will be irreversibly/reversibly electropo- rated. Nevertheless, live tissues are more complex, especially malignant tissues which are inherently inhomogeneous, and therefore assuming a statistical effect of EP parameters maybe more appropriate.3233 For this reason we chose to apply a statistical model to describe reversible/irreversible effects in vivo. The Peleg-Fermi model is the most widely used mathematical model for describing cell death as a consequence of IRE in medicine.32-34 Although several other models have been proposed35 the Peleg-Fermi model seems the most adequate since it includes dependency on the number of pulses as well as in electrical field. For this reason we decided to apply it on our experimental data and further extend it to irreversible and reversible EP effects in vivo. The Peleg-Fermi statistical model was first introduced as a model describing the survival of bacteria after exposure to pulsed electrical fields.36 Later on it was suggested that this model can be adapted to describe the effects of IRE.32-34 Goldberg and Rubinsky32 extrapolated experimental data obtained using prostate cancer cells and demonstrated the feasibility of applying this model to describe the effects of IRE for up to 10 treatment pulses. Garcia et al. extended the model up to 90 pulses, by theoretical analysis that is yet to be confirmed with experimental data.34 Treatment parameters such as pulse shape, amplitude, frequency, duration and number of puls-es37 38 affect treatment outcome. Here, we chose to study and model the effect of number of pulses while other pulse parameters remain fixed. A numerical model describing electric field distribution in the brain tissue based on the applied voltage, tissue and electrodes electrical properties and electrodes configuration was constructed. The calculated electrical field was then implemented in the statistical model that was estimating the effect of the number of pulses on the outcome- irreversible damage and BBB disruption. The first goal of our study presented below was to extend the Peleg-Fermi model to describe a wider range of the number of treatment pulses in vivo and to validate the extended model using experimental data obtained from naive rats treated with EP in the brain. The second goal was to adapt the statistical Peleg-Fermi model to describe the effects of pulse parameters on BBB disruption. BBB disruption is a vital key in treating brain tumors since it is important to disrupt a large enough volume surrounding the tumor mass to enable efficient drug penetration Radiol Oncol 2016; 50(1): 28-38. 30 Sharabi S et al. / A statistical model describing brain electroporation 30 into the infiltrating zone. Once established, models describing both IRE and BBB disruption can be implemented to provide a complete treatment planning for brain tumors with EP. Materials and methods Animal experiments The study was approved by and performed in accordance with the guidelines of The Animal Care and Use Committee of the Sheba Medical Center, which is approved by the Israeli authorities for animal experimentation. We have recently presented the results of an animal experiment designed to study both IRE and BBB disruption using the same experimental setup.67 Here we describe in detail the aspects relevant to our statistical model which are based on that experimental data. Our unique electrode setup employs a single insulated intracranial needle electrode with an exposed tip placed in the target tissue and an external surface electrode pressed against the skin. The electric field produced by this electrode configuration is highest at the exposed tip of the intracranial electrode tissue interface and then decays with the square of the distance. Therefore, the electric fields surrounding the needle electrode tip induce nearly spherical IRE effects at the target tissue and gradually decrease further away to reversible EP effects which induce BBB disruption. Regions of interest (ROIs) plotted on MR images acquired post EP treatments with various pulse parameters were used for calculating the tissue damage and BBB disruption radii. We then studied the correlation between the experimental radii and the extended statistical model. Animal model and procedure The study was performed by treating 46 male Spring Dawly rats with 50 |js monopolar electric pulses at 1 Hz and 600 V, as previously described.7 The rats were divided into seven groups of 5-7 rats each, treated with varying number of pulses (N = 10, 45, 90, 180, 270, 450 and 540). MR imaging Rats were scanned 30 minutes post treatment and periodically thereafter up to 2 weeks post treatment, using a 1.5 T GE Optima MR system (Optima MR450w, General Electric, Milwaukee). The MR sequences included contrast-enhanced T1- weighted MRI for depiction of BBB disruption and T2-weighted MRI for depiction of tissue response. Gradient echo (GE) MRI was acquired to assess possible procedure-related bleeding. The damage radius induced by IRE (rd) (in mm) for each rat was calculated from the hyper-intense regions on T2-weighted MR images acquired two weeks post treatment. This time point was previously determined by histology as adequate to describe IRE.7 BBB disruption radius (rb), referring to the maximal radius of tissue in which the BBB was breached, was calculated from enhancing regions on contrast-enhanced T1-weighted MR images acquired 30 minutes post EP treatment. In both cases the radii were calculated by delineating ROIs over the entire enhancing region in each slice (excluding the ventricles). The number of pixels in the ROIs was then counted and multiplied by the volume of a single pixel to receive the ROI volume. The slice thickness was 2 mm and in-plane pixel size was 0.3 X 0.3 mm. Radii of each slice was then extracted by calculating the biggest radius based on the Euclidean distance transform of the corresponding slice. The biggest radii computed over all slices were chosen as IRE radius and BBB disruption radius. The radii rd and rb where then plotted as a function of the number of treatment pulses (N) to determine the dependence of the radii on the number of treatment pulses. Numerical modeling The mathematical models were based on a two-dimensional finite element model (assuming spherical symmetry of the produced IRE lesions and BBB disruption) (Figure 1) that was implemented in the COMSOL software package (Comsol Multiphysics, v.4.2a; Stockholm, Sweden) as previously described.734 The rat head and chest were modeled as a 30 x 15 mm ellipse (Figure 1C) with an initial conductivity of 0.258 S/m to match the conductivity used by Sel et al.37 The electric field was described by the Laplace equation for electric potential distribution in a volume conductor: V-(a(E)V0 is the applied potential on the intracranial electrode. The boundaries where the analyzed domain was not in contact with an electrode were treated as electrically isolative and Neumann boundary condition was set to zero on the outer border of the model: fr = 0 [4] V• (/cVT) + wbcb(Ta -T) + Qmet + q" Qmef = a|Vp|2 [6] where k is the thermal conductivity of the tissue, T is the temperature, wb is the blood perfusion, cb is the heat capacity of the blood, Ta is the arterial temperature, q''' is the metabolic heat generation, p is the tissue density, cp is the heat capacity of the tissue and is the local voltage amplitude. Qmel accounts for Joule heating, where ^ is the electrical potential and a is the electrical conductivity of the ® ▼ 2.3312x10"" ▲ 38.835 where n denotes the normal to the boundary. Thermal modeling Control of the temperature during EP treatments is important in order to avoid damage to unwanted regions. The goal is to achieve complete coverage of the targeted tissue with sufficiently high electric field while ensuring that the temperature increase during the procedure does not generate thermal damage. The thermal effects of EP were determined from solution of the modified Pennes' bioheat equation (equation [5]) in the 2D numerical model with the inclusion of the Joule heating source term. A duty-cycle approach was used, in which a time dependent solver for the duration of the treatment was applied and the thermal dissipation was multiplied by the pulse length. lp dt [5] ® 0 10 x(mm) FIGURE 1. Simulation results. (A) Electric field distribution in the numerical model. The shape of the field assumes a nearly spherical shape. (B) Temperature distribution after 540 pulses. (C) Model geometry including the location of the electrodes (red arrows) tissue. The initial brain temperature was set to 37°C to match human temperature although anesthe-sized rat temperature is around 32°C. The parameter values utilized in the bioheat equation were taken from the literature40 and were used by others to follow/measure temperature increase and determine possible thermal damage due to EP treat-ments.4142 All parameters used in the simulations are summarized in Table 1. The thermal properties of the silver plating and copper were taken from the Comsol Multiphysics database. Statistical modeling The original Peleg-Fermi model computes the ratio (S) of surviving bacteria after EP. Here we extended this model to describe the effects of EP on brain tissue as following: Radiol Oncol 2016; 50(1): 28-38. 32 Sharabi S et al. / A statistical model describing brain electroporation 32 TABLE 1. Material properties used for numerical model Brain a - basic conductivity 0.258[S/m] k - Thermal conductivity 0.0565[W/(m*K)] Cp - Heat capacity 3680 [J/(kg*K)] p - density 1039 [kg/mA3] Q'"- metabolic heat generation 10437 [W/mA3] T - temperature 37°C Blood Cp-heat capacity 3840 [J/(kg*K)] p density 1060 [kg/mA3] Wb-Perfusion rate 7.15E-3 [1/s] copper a - basic conductivity 5.998E7 [S/m] k - thermal conductivity 400 [W/(m*K)] Cp heat capacity 385 [J/(kg*K)] p - Density 8700 [kg/mA3] Silver a - basic conductivity 6.273E7 [W/mA3] k - thermal conductivity 429 [W/(m*K)] Cp heat capacity 234 [J/(kg*K)] p - Density 10500 [kg/mA3] S(E,N) = 1 + exp E-Ec(N) A(N) [7] First, the model was adapted to predict tissue damage (cell death) probability induced by EP. In the Peleg-Fermi model the probability for cells survival is given by: 1 where E is the electrical field, N is the number of pulses, Ec is the critical electric field in which 50% of the cells are killed and A is a kinetic constant which defines the slope of the curve. The electric field calculated using the numerical model was exported to Matlab (R2011a, Mathworks, USA) and was implemented in the Peleg-Fermi model. We have previously shown that the hyper-intense regions on T2-weighted MRI obtained 14 days post treatment were significantly correlated with rarified regions in histology, confirming that these regions represent damaged tissues.7 Based on this, rd was set as S(E,N) = 0, assuming over 99.99% of the cells were irreversibly electroporated. An optimization based on A Nelder-Mead simplex algorithm43 with added constrains was applied to Equation [7] for each group treated with N pulses, calculating a map of S(E), until r(S = 0) matched r . The coefficients E and A for the differ- dc ent number of pulses were extracted and behavior equations were fitted to Ec(N) and A(N). For each group treated with N pulses, Electric field distribution (E) was calculated using COMSOL Multiphisics and extracted to Matlab. The map E, along with the equation [7] allows to associate a map of S with any pair of the Fermi distribution (Ec,A). From the S map, the two isocontours of S = 0.9999 and S = 0.0001 are fitted to circles. An optimization based on A Nelder-Mead simplex algorithm on Ec and A as variables is used to find the (Ec,A) pair of parameters best corresponding to rd/rb. The process of extracting r from S is nonlinear as it is based on fitting S = 1 iso-contour to a circle. Therefor the global dependency between Ec, A and rb/rd is noisy. This noisiness could potentially cause problems with computation of derivatives. Additionally, since S is monotonous there is no risk of the simplex finding a local minimum. In order to assess whether the goodness of the Ecd(N) and Ad(N) (Ec and A for IRE) fits to the experimental data, r(S = 0) for different number of treatment pulses was calculated and compared to rd. Although the Peleg-Fermi model was originally used to describe cell death, here we adapted it to describe BBB disruption as well and calculated the relevant coefficients. For this purpose the model was fitted to the radii calculated from contrast-enhanced T1-weighted MR Images. This time rb was set as BBB(E,N) = 1, meaning less then 0.001b% of the BBB was disrupted in radii larger than rb. After determining Ecb and Ab (Ec and A for BBB disruption) for each N and the behavior equations Ec(N) and A(N), the goodness of the fit to the experimental data was evaluated by recalculating r(BBB = 1) and fitting it to rb. The electrical field threshold for cell kill, i.e. IRE extent and for BBB disruption, i.e. reversible EP extent, for different N values were then extracted from the results of the model and compared with thresholds reported in the literature. Results MR images of 46 rats that were previously treated with EP as described above were included in the current analysis. Treatment parameters were 600 V, 50 |js pulses at 1 Hz with varying number of treatment pulses from 10 to 540 pulses. The extent of tissue damage and BBB disruption, i.e. rd- the irreversible damage radius and rb - the BBB disruption radius were calculated from the MR images acquired 30 minutes post treatment and 2 weeks post treatment as described in the Methods section. Radiol Oncol 2016; 50(1): 28-38. Sharabi S et al. / A statistical model describing brain electroporation 33 Dependence on the number of treatment pulses The average radius of each treatment group as calculated from the MR images is presented in Table 2. The dependence of r on N has been previously described by both logarithmic and power functions.44 Here, by fitting the mean rd of each treatment group to the number of electric pulses - N, we found the logarithmic function to provide a better fit to the data, resulting in the following dependence of r, on N: rd(N) = 0.3267 • ln(0.8123 • N) [8] r = 0.84, p < 0.005. Similarly, by fitting the mean rb of each treatment group to N, the dependence of rb on N was found to be: \ «ft. w ® ^ I &f w W